DataTypes
Object
Annotation
AntigenicAnnotation
CpGAnnotation
EquicktandemAnnotation
FeatureAnnotation
MolWeightAnnotation
MotifAnnotation
ScoredMotifAnnotation
InterProMotifAnnotation
RestrictAnnotation
SigcleaveAnnotation
StructureBoundaries
StructureFragment
TransmembraneAnnotation
AnnotationHits
Array
ArrayFloat
ArrayInteger
ArrayString
ArrayXYData
IntegerMatrix
RExpression_Matrix
BasicAnnotation
BioData
OneBioData
Boolean
Clustering
CommentedObject
DateTime
Domain
AnnotatedDomain
Element
ElementFloat
ElementInteger
ElementString
ElementXYData
ENSEMBLHomolog
File
BinaryFile
BinaryImage
BinaryMatrix
TextFile
ExtendedFragment
SimpleFragment
SimpleSequence
Fileprueba
Float
Fragment
ScoredFragment
FullFragment
FullFragmentSeq
GeneExpresion
Cluster
GeneExpressionMatrix
MicroArrayDerivedData
Rlayoutandweights
RobjectMA
RobjectRG
GOTerm
HierarchicalClustering
HijoFile
HMMPfam_Report
HMMSearch_Report
Image_Encoded
Typed_Image
Integer
Interaction
InteractionMethod
Interactor
ISS_Report
LogEvent
LogReport
MapFragsParameters
Matrix
MatrixFloat
Distance_Matrix
NCut_Matrix
MatrixInteger
MatrixString
OMIM2
Pattern
MatchingPattern
PepinfoReport
PrositeMotif
QueryResults
References
Rules
Script
MapScript
ReduceScript
Search
Edge
Resource
DataTypeData
OperationData
ParameterData
ToolData
SearchResult
Workflow
String
StructureDomain
text-plain
text-formatted
BLAST-Text
Clustalw_Evaluated_Text
ClusterProfile_Text
CodcmpReport_Text
CodonFreq_Text
CodonUsageTable_Text
Consensus_Sequence_Text
HMM_Text
DSSP_Text
EMBL_Text
Enzymatic_Text
FASTA
FASTA_AA
FASTA_AA_multi
FASTA_Base_Quality
FASTA_Base_Quality_multi
FASTA_NA
FASTA_NA_multi
FASTA_Text
FSOLV_Text
FSSP_Text
GenBank_Text
GenCode_Text
GFF
GFF2
GFF3
HSSP_Text
List_Text
MEME_Text
Meta_Alignment_Text
MicroArrayData_Text
mmCIF-Text
MotifMatrix
NCBI_BLAST_Text
NCut_Clusters
NCut_Text
Newick_Text
PDB-Text
AnnotatedStructure
PDB_Enriched
Structure_Alignment_Report
Pepcoil_Text
Pepstats_Text
PHD_Text
Phylip_treefile_Text
Phylip_tree_Text
PMUT_Text
PostscriptFile
PrositeDoc_Text
RefSeq_Text
RFile
SequenceDescription_Text
Sequence_alignment_report
Clustalw_Text
MSF
Phylip_Text
Phylip_Interleaved_Text
PIR_Text
Stockholm_Text
SwissProt_Text
TFscan_Text
XYData_Text
text-html
DGPI_Report
TreeDet_Annotation_HTML
text-xhtml
text-xml
Annotated_ids_list
BLAST_XML
DASGFF
FunCUT_Annotation_XML
GOGraph
IntAct_XML
ISS_Annotation_XML
TreeDet_Annotation_XML
TreeDet_Report
VirtualSequence
GenericSequence
AminoAcidSequence
CommentedAASequence
AnnotatedAASequence
AntigenicAnnotatedAASequence
AntigenicReport
InterProMotifAnnotatedAASequence
MolWeightsAnnotatedAASequence
DigestReport
EmowseAnnotatedAASequence
MotifAnnotatedAASequence
PPSearchReport
ScoredMotifAnnotatedAASequence
PatmatdbReport
PatmatmotifsReport
SigcleaveAnnotatedAASequence
SigcleaveReport
TransmembraneAnnotatedAASequence
TransmembraneReport
DomainAnnotatedSequence
FeatureAASequence
NucleotideSequence
CommentedNASequence
AnnotatedNASequence
CpGAnnotatedNASequence
CpGReport
EquicktandemAnnotatedNASequence
EquicktandemReport
RestrictAnnotatedNASequence
RestrictReport
DNASequence
CommentedDNASequence
TTS
RNASequence
CommentedRNASequence
PropertySequence
Services
Service
Bioinformatics
TestRMax
Alignment
DPclasic
DPfrag
DPpal
Frag2png
fragP2png
Mat2png
runBoolean_test
runEmbossConsFromAlignment
runEmbossConsFromAlignment
runMetaAlignment
runMetaAlignmentGFF
runMultiPairwiseMetaAlignment
runMultiPairwiseMetaAlignmentGFF
runUMAtest
say_hello
say_hello2
ServicioDeMentira
showfrags
Aligning_Differences
Aligning_Structures
runDaliLite
DotPlotting
Multiple_Sequence_Comparison
runClustalwFast
runClustalwFastUMA
runClustalwFull
runFASSFromMSF
runFASShtmlFromFASTA
runFASShtmlFromMSF
runFASShtmlFromPIR
runFASSxmlFromFASTA
runFASSxmlFromMSF
runFASSxmlFromPIR
runMBhtmlFromFASTA
runMBhtmlFromMSF
runMBhtmlFromPIR
runMBxmlFromFASTA
runMBxmlFromMSF
runMBxmlFromPIR
runSMhtmlFromFASTA
runSMhtmlFromMSF
runSMhtmlFromPIR
runSMxmlFromFASTA
runSMxmlFromMSF
runSMxmlFromPIR
runSquareFromFASTA
runSquareFromMSF
runSquareFromPIR
runTcoffeeFromSequences
Pairwise_Sequence_Comparison
Pairwise_Global_Aligning
Pairwise_Local_Aligning
runNCBIBlastn
runNCBIBlastp
runNCBIBlastp1
runNCBITBlastn
runNCBITBlastn_2Seqs
runNCBITBlastx
runPSIBlast
runPSIBlastpFromAminoAcidSequence
runRPSBlast
runWUBlastn
runWUTBlastn
runWUTBlastx
Profiling
runHMMSearchAgainstSeqs
Single_Sequence_Comparison
Pairwise_2Global_Aligning
Pairwise_2Local_Aligning
runEmbossWaterFromSequences
analysis
runSOTAClustering
Annotations
getAnnotationsFromUniProt
getGraphFromTerm
getLevelFrequencyFromHierarchy
getUMAtest
RServer
RService
RTestService
runFatiGOplusCompare
runFatiGOplusGenomics
runFatiGOplusSearch
runFunCUT
runFunCUT
runFunCUTSync
runISS
runISSComplete
runOFunCUT
satHello2
sayHello
sayHelloChri
sma3sv2
Biochemistry
EnzymeKinetics
runEmbossFindkm
runEmbossFindkm
Clustering
runHierarchicalClustering
codons
CodonFreq
CodonUsagexAA
extractGenes
GenBank2FastaGenes
OTPrueba
SayHelloOscar
BioData
CodonFreq_b
CodonUsagexAA_b
extractGenes_b
Data subset
Database
Retrieving
getCATHHierarchyCodesFromPDBID
getInteractingMethods
getInteractionMethodDesc
getInteractions
getInteractionsXML
getStatisticalLog
GettingAlignments
GettingInteractions
GettingSequences
getFastaSequence
GettingAminoacids
getAminoAcidSequence
getAminoAcidSequenceCollection
getAminoAcidSequenceFromPDB
getAminoAcidSequenceUMA
getSequenceUMA
GettingNucleotides
getCDSSequence
getNucleotideSequence
getNucleotideSequenceUMA
getSequenceByRegionFromENSEMBL
GettingStructures
getEntryFromPDB
getHeaderFromPDB
getStructureFromPDB
GettingText
getCodonTableFromEmboss
getEntryFromDSSP
getEntryFromFSSP
getEntryFromFSSP
getEntryFromHSSP
getEntryFromOMIM
Searching
getCATHDomainsFromPDBID
getDomainArchitectureFromPfam
textQueryUniprot
Distances
Arraying
Phylogenetics
runCreateTreeFromClustalw
Distance_Matrix_Computing
runNCut
Phylogenetics_Tree_Computing
runCreateTreeFromClustalw
GeneExpresion
runDifferentialexpr
runLoadFilter
runNormalization
GE Data Management
Microarray PostProcessing
GE Matrix Clustering
GE Matrix Preprocessing
Projection Methods
Statistical Analisys
Microarray PreProcessing
GE Data Normalization
MicroarrayDataDoubleScanMoby
MicroArrayDataLowess
GE Plots
createAMPlot
createDensityPlot
createPNPlot
createPPPlot
createQQPlot
createRGPlot
createSlidePlot
Read GE Data
ReadOneChannelMicroarrayData
Identification
Proteomics
Searching
getCATHDomainsFromPDBID
getDomainArchitectureFromPfam
textQueryUniprot
SequenceAnalysis
getDomainArchitectureByHMMPfam
runEmbossSigcleaveFromSequence
runEmbossTmapFromSequence
runMemeHTML
runMemeText
Composition
runEmbossCodcmpFromTables
runEmbossCodcmpFromTables
runEmbossCuspFromID
runEmbossCuspFromSequence
runEmbossPepstatsFromSequence
Editing
viaBioinformaticsApplication
viaWEB
GeneFinding
runGeneIDGFF
runGeneIDGFF3
runSGP2GFF
Mutation
runPMUTHotSpotFromAminoAcidSequence
Nucleotic_Motifs
runEmbossCpGplotFromSequence
runEmbossCpGreportFromSequence
runEmbossTFscanFromSequence
runMatScanGFF
runMatScanGFFCollectionVsInputMatrices
Primers
Protein_Motifs
getPrositeAnnStructure
getPrositeAnnStructureFromPDBID
runEmbossPatmatdb
runEmbossPatmatdbFromSequence
runEmbossPatmatmotifsFromSequence
runPPSearchAgainstProsite
Repetitions
runEmbossEquicktandemFromSequence
Restrictions
runEmbossRestrictFromSequence
StructuralStudies
Aligning_Structures
runDaliLite
Interactions
Nucleotics_2D_Structures
PhysicoChemical_Properties
runEmbossAntigenicFromSequence
runEmbossChargeFromSequence
runEmbossOctanolFromSequence
runEmbossPepinfoFromSequence
runEmbossPepwindowallFromSequences
runEmbossPepwindowFromSequence
runFSOLVFromPDBText
runPHDFromAminoAcidSequence
Protein_3D_Structures
AbInitio_Methods
Homology_Methods
Threadind_Methods
Protein_Secondary_Structures
browseCATHClassification
runEmbossPepcoilFromSequence
Translating
runEmbossGetorfFromSequence
runEmbossTranseqFromSequence
runNucleotideSequenceTo6ORFs
translateGeneIDGFFPredictions
ObjectHandling
Echo_Test
removeDuplicatedObjects
Converting
fromClustalwToPhylip
fromFASTAToAminoAcidSequence
fromFASTAToAminoAcidSequenceCollection
fromFASTAToDNASequence
fromFASTAToDNASequenceCollection
fromFunCUTtoDASGFF
fromGenericSequenceCollectionToFASTA
frommmCifToPDBText
fromNCutTextToNCutMatrix
fromXYDataTextToArrayFloat
parseFromIntAct
Creating
Displaying
displayDomainsFromAnnStructure
multiplotArrayXYData
runSleepSeconds
Editing
viaBioinformaticsApplication
viaWEB
Joining
Parsing
fromMetaAlignmentsToScoreMatrix
fromMetaAlignmentsToTextScoreMatrix
getBestHitsFromBlast
mirroredService
mirroredService2
mirroredService3
mirroredService4
parseAminoAcidSequenceFromPDBText
parseENSEMBLSliceInformation
parseMotifMatricesFromMEME
parseMultipleAlignFromBLASTText
parserISSReportIntoISSAnnotation
parserISSReportIntoNCBIBlastText
parserISSReportIntoNCutMatrix
parseRulesFromMotif
RBoxPlot
RCorrelationPlot
RHistogramPlot
R_ConverTable
R_LogRatiofromgpr
Splitting
Search
feedback
genWorkflow
getCATHDomainsFromPDBID
getDomainArchitectureFromPfam
search
textQueryUniprot
Namespaces
AGI_LocusCode
getInteractingMethods
getInteractions
procBinaryArray
CATH
DSSP
EMBL
getCDSSequence
getFastaSequence
getNucleotideSequence
runEmbossCuspFromID
ENSEMBL
FLYBASE
FSSP
getEntryFromFSSP
GenBank
getCDSSequence
getFastaSequence
getNucleotideSequence
runEmbossCuspFromID
GO
HSSP
HUGO
IntAct
getInteractingMethods
getInteractions
getInteractionsXML
INTERPRO
NCBI_Acc
PDB
getAminoAcidSequenceFromPDB
getCATHDomainsFromPDBID
getCATHHierarchyCodesFromPDBID
getEntryFromDSSP
getEntryFromFSSP
getEntryFromHSSP
getEntryFromPDB
getFastaSequence
getHeaderFromPDB
getPrositeAnnStructureFromPDBID
getStructureFromPDB
parseAminoAcidSequenceFromPDBText
parseMultipleAlignFromBLASTText
runFSOLVFromPDBText
runPHDFromAminoAcidSequence
runPMUTHotSpotFromAminoAcidSequence
runPSIBlastpFromAminoAcidSequence
Pfam
PMID
prueba
procBinaryArray
pruebaname
Prueba_
PSI-MI
getInteractionMethodDesc
RefSeq
getAminoAcidSequence
getFastaSequence
getNucleotideSequence
runEmbossCuspFromID
REGIA
SGD
SPTR
getInteractingMethods
getInteractions
getInteractionsXML
Swiss-Prot
getAminoAcidSequence
getAminoAcidSequenceCollection
getDomainArchitectureFromPfam
getFastaSequence
getInteractingMethods
getInteractions
getInteractionsXML
parseMultipleAlignFromBLASTText
runPHDFromAminoAcidSequence
runPMUTHotSpotFromAminoAcidSequence
runPSIBlastpFromAminoAcidSequence
THESEU_minamespace1
TrEMBL
getAminoAcidSequence
getAminoAcidSequenceCollection
getDomainArchitectureFromPfam
getFastaSequence
getInteractingMethods
getInteractions
getInteractionsXML
parseMultipleAlignFromBLASTText
runPHDFromAminoAcidSequence
runPMUTHotSpotFromAminoAcidSequence
runPSIBlastpFromAminoAcidSequence
UniProt
getAminoAcidSequence
getAminoAcidSequenceCollection
getDomainArchitectureFromPfam
getFastaSequence
getInteractingMethods
getInteractions
getInteractionsXML
parseMultipleAlignFromBLASTText
runPHDFromAminoAcidSequence
runPMUTHotSpotFromAminoAcidSequence
runPSIBlastpFromAminoAcidSequence
Hide empty branches
Expand all
Collapse all
Service registration
Help